Items where Author is "Lu, X"

Article

Chen, L and Cai, C and Chen, V and Lu, X (2016) Learning a hierarchical representation of the yeast transcriptomic machinery using an autoencoder model. BMC Bioinformatics, 17 (1).

Lu, S and Mandava, G and Yan, G and Lu, X (2016) An exact algorithm for finding cancer driver somatic genome alterations: The weighted mutually exclusive maximum set cover problem. Algorithms for Molecular Biology, 11 (1).

Lu, S and Lu, KN and Cheng, SY and Hu, B and Ma, X and Nystrom, N and Lu, X (2015) Identifying Driver Genomic Alterations in Cancers by Searching Minimum-Weight, Mutually Exclusive Sets. PLoS Computational Biology, 11 (8). ISSN 1553-734X

Ogoe, HA and Visweswaran, S and Lu, X and Gopalakrishnan, V (2015) Knowledge transfer via classification rules using functional mapping for integrative modeling of gene expression data. BMC Bioinformatics, 16 (1).

Chen, V and Lu, X (2013) Conceptualization of molecular findings by mining gene annotations. BMC Proceedings, 7.

Lu, S and Lu, X (2013) Using graph models to find transcription factor modules: The hitting set problem and an exact algorithm. Algorithms for Molecular Biology, 8 (1).

Richards, AJ and Schwacke, JH and Rohrer, B and Cowart, LA and Lu, X (2012) Revealing functionally coherent subsets using a spectral clustering and an information integration approach. BMC Systems Biology, 6 (SUPPL3).

Qin, T and Tsoi, LC and Sims, KJ and Lu, X and Zheng, WJ (2012) Signaling network prediction by the Ontology Fingerprint enhanced Bayesian network. BMC Systems Biology, 6 (SUPPL3).

Osmanbeyoglu, HU and Hartmaier, RJ and Oesterreich, S and Lu, X (2012) Improving ChIP-seq peak-calling for functional co-regulator binding by integrating multiple sources of biological information. Series on Advances in Bioinformatics and Computational Biology, 13. ISSN 1751-6404

Conference or Workshop Item

Chen, L and Cai, C and Chen, V and Lu, X (2015) Trans-species learning of cellular signaling systems with bimodal deep belief networks. In: UNSPECIFIED.