Items where Author is "Kaminski, N"

Fingerlin, TE and Zhang, W and Yang, IV and Ainsworth, HC and Russell, PH and Blumhagen, RZ and Schwarz, MI and Brown, KK and Steele, MP and Loyd, JE and Cosgrove, GP and Lynch, DA and Groshong, S and Collard, HR and Wolters, PJ and Bradford, WZ and Kossen, K and Seiwert, SD and Bois, RM and Garcia, CK and Devine, MS and Gudmundsson, G and Isaksson, HJ and Kaminski, N and Zhang, Y and Gibson, KF and Lancaster, LH and Maher, TM and Molyneaux, PL and Wells, AU and Moffatt, MF and Selman, M and Pardo, A and Kim, DS and Crapo, JD and Make, BJ and Regan, EA and Walek, DS and Daniel, JJ and Kamatani, Y and Zelenika, D and Murphy, E and Smith, K and McKean, D and Pedersen, BS and Talbert, J and Powers, J and Markin, CR and Beckman, KB and Lathrop, M and Freed, B and Langefeld, CD and Schwartz, DA (2016) Genome-wide imputation study identifies novel HLA locus for pulmonary fibrosis and potential role for auto-immunity in fibrotic idiopathic interstitial pneumonia. BMC Genetics, 17 (1).

Huang, Y and Ma, SF and Vij, R and Oldham, JM and Herazo-Maya, J and Broderick, SM and Strek, ME and White, SR and Hogarth, DK and Sandbo, NK and Lussier, YA and Gibson, KF and Kaminski, N and Garcia, JGN and Noth, I (2015) A functional genomic model for predicting prognosis in idiopathic pulmonary fibrosis. BMC Pulmonary Medicine, 15 (1).

Kim, SH and Herazo-Maya, JD and Kang, DD and Juan-Guardela, BM and Tedrow, J and Martinez, FJ and Sciurba, FC and Tseng, GC and Kaminski, N (2015) Integrative phenotyping framework (iPF): Integrative clustering of multiple omics data identifies novel lung disease subphenotypes. BMC Genomics, 16 (1).

Liao, SG and Lin, Y and Kang, DD and Chandra, D and Bon, J and Kaminski, N and Sciurba, FC and Tseng, GC (2014) Missing value imputation in high-dimensional phenomic data: Imputable or not, and how? BMC Bioinformatics, 15 (1).

Vuga, LJ and Milosevic, J and Pandit, K and Ben-Yehudah, A and Chu, Y and Richards, T and Sciurba, J and Myerburg, M and Zhang, Y and Parwani, AV and Gibson, KF and Kaminski, N (2013) Cartilage oligomeric matrix protein in idiopathic pulmonary fibrosis. PLoS ONE, 8 (12).

Jain, S and Kapetanaki, MG and Raghavachari, N and Woodhouse, K and Yu, G and Barge, S and Coronnello, C and Benos, PV and Kato, GJ and Kaminski, N and Gladwin, MT (2013) Expression of Regulatory Platelet MicroRNAs in Patients with Sickle Cell Disease. PLoS ONE, 8 (4).

Lino Cardenas, CL and Henaoui, IS and Courcot, E and Roderburg, C and Cauffiez, C and Aubert, S and Copin, MC and Wallaert, B and Glowacki, F and Dewaeles, E and Milosevic, J and Maurizio, J and Tedrow, J and Marcet, B and Lo-Guidice, JM and Kaminski, N and Barbry, P and Luedde, T and Perrais, M and Mari, B and Pottier, N (2013) miR-199a-5p Is Upregulated during Fibrogenic Response to Tissue Injury and Mediates TGFbeta-Induced Lung Fibroblast Activation by Targeting Caveolin-1. PLoS Genetics, 9 (2). ISSN 1553-7390

Campbell, JD and Luo, L and Liu, G and Xiao, J and Gerrein, J and Guardela, B and Tedrow, JR and Aleksyev, Y and Yang, IV and Correll, M and Geraci, MW and Quackenbush, J and Sciurba, FC and Schwartz, DA and Kaminski, N and Lenburg, M and Beane, J and Spira, A (2013) Characterizing The Small Rna Transcriptome Associated With COPD And Ild Using Next Generation Sequencing. AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE, 187. ISSN 1073-449X

Coronnello, C and Hartmaier, R and Arora, A and Huleihel, L and Pandit, KV and Bais, AS and Butterworth, M and Kaminski, N and Stormo, GD and Oesterreich, S and Benos, PV (2012) Novel Modeling of Combinatorial miRNA Targeting Identifies SNP with Potential Role in Bone Density. PLoS Computational Biology, 8 (12). ISSN 1553-734X

Rabinovich, EI and Kapetanaki, MG and Steinfeld, I and Gibson, KF and Pandit, KV and Yu, G and Yakhini, Z and Kaminski, N (2012) Global methylation patterns in idiopathic pulmonary fibrosis. PLoS ONE, 7 (4).

Zhang, Y and Handley, D and Kaplan, T and Yu, H and Bais, AS and Richards, T and Pandit, KV and Zeng, Q and Benos, PV and Friedman, N and Eickelberg, O and Kaminski, N (2011) High throughput determination of TGFβ1/SMAD3 targets in A549 lung epithelial cells. PLoS ONE, 6 (5).

Xue, J and Gochuico, BR and Alawad, AS and Feghali-Bostwick, CA and Noth, I and Nathan, SD and Rosen, GD and Rosas, IO and Dacic, S and Ocak, I and Fuhrman, CR and Cuenco, KT and Smith, MA and Jacobs, SS and Zeevi, A and Morel, PA and Pilewski, JM and Valentine, VG and Gibson, KF and Kaminski, N and Sciurba, FC and Zhang, Y and Duncan, SR (2011) The HLA class II allele DRB1*1501 is over-represented in patients with idiopathic pulmonary fibrosis. PLoS ONE, 6 (2).

Gilani, SR and Vuga, LJ and Lindell, KO and Gibson, KF and Xue, J and Kaminski, N and Valentine, VG and Lindsay, EK and George, MP and Steele, C and Duncan, SR (2010) CD28 down-regulation on circulating CD4 T-cells is associated with poor prognoses of patients with idiopathic pulmonary fibrosis. PLoS ONE, 5 (1).

Bon, JM and Leader, JK and Weissfeld, JL and Coxson, HO and Zheng, B and Branch, RA and Kondragunta, V and Lee, JS and Zhang, Y and Choi, AMK and Lokshin, AE and Kaminski, N and Gur, D and Sciurba, FC (2009) The influence of radiographic phenotype and smoking status on peripheral blood biomarker patterns in chronic obstructive pulmonary disease. PLoS ONE, 4 (8).

di Giuseppe, M and Gambelli, F and Hoyle, GW and Lungarella, G and Studer, SM and Richards, T and Yousem, S and McCurry, K and Dauber, J and Kaminski, N and Leikauf, G and Ortiz, LA (2009) Systemic inhibition of NF-κB activation protects from silicosis. PLoS ONE, 4 (5).

Corcoran, DL and Pandit, KV and Gordon, B and Bhattacharjee, A and Kaminski, N and Benos, PV (2009) Features of mammalian microRNA promoters emerge from polymerase II chromatin immunoprecipitation data. PLoS ONE, 4 (4).

Rosas, IO and Richards, TJ and Konishi, K and Zhang, Y and Gibson, K and Lokshin, AE and Lindell, KO and Cisneros, J and MacDonald, SD and Pardo, A and Sciurba, F and Dauber, J and Selman, M and Gochuico, BR and Kaminski, N (2008) MMP1 and MMP7 as potential peripheral blood biomarkers in idiopathic pulmonary fibrosis. PLoS Medicine, 5 (4). 0623 - 0633. ISSN 1549-1277

Dolinay, T and Wu, W and Kaminski, N and Ifedigbo, E and Kaynar, AM and Szilasi, M and Watkins, SC and Ryter, SW and Hoetzel, A and Choi, AMK (2008) Mitogen-activated protein kinases regulate susceptibility to ventilator-induced lung injury. PLoS ONE, 3 (2).

Pardo, A and Gibson, K and Cisneros, J and Richards, TJ and Yang, Y and Becerril, C and Yousem, S and Herrera, I and Ruiz, V and Selman, M and Kaminski, N (2005) Up-regulation and profibrotic role of osteopontin in human idiopathic pulmonary fibrosis. PLoS Medicine, 2 (9). 0891 - 0903. ISSN 1549-1277