Items where Author is "Hatfull, GF"

Lima-Junior, JD and Viana-Niero, C and Conde Oliveira, DV and Machado, GE and Rabello, MCDS and Martins-Junior, J and Martins, LF and Digiampietri, LA and Da Silva, AM and Setubal, JC and Russell, DA and Jacobs-Sera, D and Pope, WH and Hatfull, GF and Leão, SC (2016) Characterization of mycobacteria and mycobacteriophages isolated from compost at the São Paulo Zoo Park Foundation in Brazil and creation of the new mycobacteriophage Cluster U. BMC Microbiology, 16 (1).

Villanueva, VM and Oldfield, LM and Hatfull, GF (2015) An unusual phage repressor encoded by mycobacteriophage BPs. PLoS ONE, 10 (9).

Cresawn, SG and Pope, WH and Jacobs-Sera, D and Bowman, CA and Russell, DA and Dedrick, RM and Adair, T and Anders, KR and Ball, S and Bollivar, D and Breitenberger, C and Burnett, SH and Butela, K and Byrnes, D and Carzo, S and Cornely, KA and Cross, T and Daniels, RL and Dunbar, D and Findley, AM and Gissendanner, CR and Golebiewska, UP and Hartzog, GA and Hatherill, JR and Hughes, LE and Jalloh, CS and De Los Santos, C and Ekanem, K and Khambule, SL and King, RA and King-Smith, C and Klyczek, K and Krukonis, GP and Laing, C and Lapin, JS and Lopez, AJ and Mkhwanazi, SM and Molloy, SD and Moran, D and Munsamy, V and Pacey, E and Plymale, R and Poxleitner, M and Reyna, N and Schildbach, JF and Stukey, J and Taylor, SE and Ware, VC and Wellmann, AL and Westholm, D and Wodarski, D and Zajko, M and Zikalala, TS and Hendrix, RW and Hatfull, GF (2015) Comparative genomics of Cluster O mycobacteriophages. PLoS ONE, 10 (3).

Hatfull, GF (2014) Mycobacteriophages: Windows into Tuberculosis. PLoS Pathogens, 10 (3). ISSN 1553-7366

Pope, WH and Jacobs-Sera, D and Best, AA and Broussard, GW and Connerly, PL and Dedrick, RM and Kremer, TA and Offner, S and Ogiefo, AH and Pizzorno, MC and Rockenbach, K and Russell, DA and Stowe, EL and Stukey, J and Thibault, SA and Conway, JF and Hendrix, RW and Hatfull, GF (2013) Cluster J Mycobacteriophages: Intron Splicing in Capsid and Tail Genes. PLoS ONE, 8 (7).

Singh, S and Ghosh, P and Hatfull, GF (2013) Attachment Site Selection and Identity in Bxb1 Serine Integrase-Mediated Site-Specific Recombination. PLoS Genetics, 9 (5). ISSN 1553-7390

Mageeney, C and Pope, WH and Harrison, M and Moran, D and Cross, T and Jacobs-Sera, D and Hendrix, RW and Dunbar, D and Hatfull, GF (2012) Mycobacteriophage marvin: A new singleton phage with an unusual genome organization. Journal of Virology, 86 (9). 4762 - 4775. ISSN 0022-538X

Jain, P and Hartman, TE and Eisenberg, N and O'Donnell, MR and Kriakov, J and Govender, K and Makume, M and Thaler, DS and Hatfull, GF and Sturm, AW and Larsen, MH and Moodley, P and Jacobs, WR (2012) φ ²GFP10, a high-intensity fluorophage, enables detection and rapid drug susceptibility testing of Mycobacterium tuberculosis directly from sputum samples. Journal of Clinical Microbiology, 50 (4). 1362 - 1369. ISSN 0095-1137

Payne, KM and Hatfull, GF (2012) Mycobacteriophage endolysins: Diverse and modular enzymes with multiple catalytic activities. PLoS ONE, 7 (3).

Hatfull, GF (2012) Complete genome sequences of 138 mycobacteriophages. Journal of Virology, 86 (4). 2382 - 2384. ISSN 0022-538X

Pope, WH and Ferreira, CM and Jacobs-Sera, D and Benjamin, RC and Davis, AJ and DeJong, RJ and Elgin, SCR and Guilfoile, FR and Forsyth, MH and Harris, AD and Harvey, SE and Hughes, LE and Hynes, PM and Jackson, AS and Jalal, MD and MacMurray, EA and Manley, CM and McDonough, MJ and Mosier, JL and Osterbann, LJ and Rabinowitz, HS and Rhyan, CN and Russell, DA and Saha, MS and Shaffer, CD and Simon, SE and Sims, EF and Tovar, IG and Weisser, EG and Wertz, JT and Weston-Hafer, KA and Williamson, KE and Zhang, B and Cresawn, SG and Jain, P and Piuri, M and Jacobs, WR and Hendrix, RW and Hatfull, GF (2011) Cluster k mycobacteriophages: Insights into the evolutionary origins of mycobacteriophage tm4. PLoS ONE, 6 (10).

Cresawn, SG and Bogel, M and Day, N and Jacobs-Sera, D and Hendrix, RW and Hatfull, GF (2011) Phamerator: A bioinformatic tool for comparative bacteriophage genomics. BMC Bioinformatics, 12.

Rondón, L and Piuri, M and Jacobs, WR and De Waard, J and Hatfull, GF and Takiff, HE (2011) Evaluation of fluoromycobacteriophages for detecting drug resistance in Mycobacterium tuberculosis. Journal of Clinical Microbiology, 49 (5). 1838 - 1842. ISSN 0095-1137

Alibaud, L and Alahari, A and Trivelli, X and Ojha, AK and Hatfull, GF and Guerardel, Y and Kremer, L (2010) Temperature-dependent regulation of mycolic acid cyclopropanation in saprophytic mycobacteria: Role of the Mycobacterium smegmatis 1351 gene (MSMEG-1351) in cis-cyclopropanation of α-mycolates. Journal of Biological Chemistry, 285 (28). 21698 - 21707. ISSN 0021-9258

Piuri, M and Jacobs, WR and Hatfull, GF (2009) Fluoromycobacteriophages for rapid, specific, and sensitive antibiotic susceptibility testing of Mycobacterium tuberculosis. PLoS ONE, 4 (3).

Marinelli, LJ and Piuri, M and Swigoňová, Z and Balachandran, A and Oldfield, LM and van Kessel, JC and Hatfull, GF (2008) BRED: A simple and powerful tool for constructing mutant and recombinant bacteriophage genomes. PLoS ONE, 3 (12).

Morris, P and Marinelli, LJ and Jacobs-Sera, D and Hendrix, RW and Hatfull, GF (2008) Genomic characterization of mycobacteriophage giles: Evidence for phage acquisition of host DNA by illegitimate recombination. Journal of Bacteriology, 190 (6). 2172 - 2182. ISSN 0021-9193

Ojha, A and Hatfull, GF (2007) The role of iron in Mycobacterium smegmatis biofilm formation: The exochelin siderophore is essential in limiting iron conditions for biofilm formation but not for planktonic growth. Molecular Microbiology, 66 (2). 468 - 483. ISSN 0950-382X

Piuri, M and Hatfull, GF (2006) A peptidoglycan hydrolase motif within the mycobacteriophage TM4 tape measure protein promotes efficient infection of stationary phase cells. Molecular Microbiology, 62 (6). 1569 - 1585. ISSN 0950-382X

Hatfull, GF and Pedulla, ML and Jacobs-Sera, D and Cichon, PM and Foley, A and Ford, ME and Gonda, RM and Houtz, JM and Hryckowian, AJ and Kelchner, VA and Namburi, S and Pajcini, KV and Popovich, MG and Schleicher, DT and Simanek, BZ and Smith, AL and Zdanowicz, GM and Kumar, V and Peebles, CL and Jacobs, WR and Lawrence, JG and Hendrix, RW (2006) Exploring the mycobacteriophage metaproteome: Phage genomics as an educational platform. PLoS Genetics, 2 (6). 0835 - 0847. ISSN 1553-7390

Ghosh, P and Wasil, LR and Hatfull, GF (2006) Control of phage Bxb1 excision by a novel recombination directionality factor. PLoS Biology, 4 (6). 0964 - 0974. ISSN 1545-7885

Casjens, SR and Gilcrease, EB and Winn-Stapley, DA and Schicklmaier, P and Schmieger, H and Pedulla, ML and Ford, ME and Houtz, JM and Hatfull, GF and Hendrix, RW (2005) The generalized transducing Salmonella bacteriophage ES18: Complete genome sequence and DNA packaging strategy. Journal of Bacteriology, 187 (3). 1091 - 1104. ISSN 0021-9193

Banaiee, N and Bobadilla-del-Valle, M and Bardarov S., J and Riska, PF and Small, PM and Ponce-de-Leon, A and Jacobs, J and Hatfull, GF and Sifuentes-Osornio, J (2001) Luciferase reporter mycobacteriophages for detection, identification, and antibiotic susceptibility testing of mycobacterium tuberculosis in Mexico. Journal of Clinical Microbiology, 39 (11). 3883 - 3888. ISSN 0095-1137

Lewis, JA and Hatfull, GF (2001) Control of directionality in integrase-mediated recombination: Examination of recombination directionality factors (RDFs) including Xis and Cox proteins. Nucleic Acids Research, 29 (11). 2205 - 2216. ISSN 0305-1048

Belanger, AE and Porter, JC and Hatfull, GF (2000) Genetic analysis of peptidoglycan biosynthesis in mycobacteria: Characterization of a ddlA mutant of Mycobacterium smegmatis. Journal of Bacteriology, 182 (23). 6854 - 6856. ISSN 0021-9193

Belanger, AE and Hatfull, GF (1999) Exponential-phase glycogen recycling is essential for growth of Mycobacterium smegmatis. Journal of Bacteriology, 181 (21). 6670 - 6678. ISSN 0021-9193

Peña, CEA and Kahlenberg, JM and Hatfull, GF (1999) Protein-DNA complexes in mycobacteriophage L5 integrative recombination. Journal of Bacteriology, 181 (2). 454 - 461. ISSN 0021-9193

Peña, CEA and Kahlenberg, JM and Hatfull, GF (1998) The role of supercoiling in mycobacteriophage L5 integrative recombination. Nucleic Acids Research, 26 (17). 4012 - 4018. ISSN 0305-1048

Klann, AG and Belanger, AE and Abanes-de Mello, A and Lee, JY and Hatfull, GF (1998) Characterization of the dnaG locus in Mycobacterium smegmatis reveals linkage of DNA replication and cell division. Journal of Bacteriology, 180 (1). 65 - 72. ISSN 0021-9193

Pedulla, ML and Hatfull, GF (1998) Characterization of the mIHF gene of Mycobacterium smegmatis. Journal of Bacteriology, 180 (20). 5473 - 5477. ISSN 0021-9193

Peña, CEA and Stoner, JE and Hatfull, GF (1996) Positions of strand exchange in mycobacteriophage L5 integration and characterization of the attB site. Journal of Bacteriology, 178 (18). 5533 - 5536. ISSN 0021-9193

Pascopella, L and Collins, FM and Martin, JM and Mong Hong Lee, and Hatfull, GF and Stover, CK and Bloom, BR and Jacobs, WR (1994) Use of in vivo complementation in Mycobacterium tuberculosis to identify a genomic fragment associated with virulence. Infection and Immunity, 62 (4). 1313 - 1319. ISSN 0019-9567

Mong Hong Lee, and Hatfull, GF (1993) Mycobacteriophage L5 integrase-mediated site-specific integration in vitro. Journal of Bacteriology, 175 (21). 6836 - 6841. ISSN 0021-9193

Rimphanitchayakit, V and Hatfull, GF and Grindley, ND (1989) The 43 residue DNA binding domain of gamma delta resolvase binds adjacent major and minor grooves of DNA. Nucleic Acids Res, 17 (3). 1035 - 1050. ISSN 0305-1048

Hatfull, GF and Joyce, CM (1986) Deletion of the spf (spot 42 RNA) gene of Escherichia coli. Journal of Bacteriology, 166 (3). 746 - 750. ISSN 0021-9193

Robinson, AC and Kenan, DJ and Hatfull, GF and Sullivan, NF and Spiegelberg, R and Donachie, WD (1984) DNA sequence and transcriptional organization of essential cell division genes ftsQ and ftsA of Escherichia coli: Evidence for overlapping transcriptional units. Journal of Bacteriology, 160 (2). 546 - 555. ISSN 0021-9193